ePrints

SARGE: A tool for creation of putative genetic networks

Lookup NU author(s): Dr Oliver Shaw, Professor Colin Harwood, Dr Jason Steggles, Professor Anil Wipat

Downloads

Full text for this publication is not currently held within this repository. Alternative links are provided below where available.

Abstract

Summary: SARGE is a tool for creating, visualizing and manipulating a putative genetic network from time series microarray data. The tool assigns potential edges through time-lagged correlation, incorporates a clustering mechanism, an interactive visual graph representation and employs simulated annealing for network optimization. © Oxford University Press 2004; all rights reserved.

Publication metadata

Author(s): Shaw OJ, Harwood C, Steggles LJ, Wipat A

Publication type: Article

Publication status: Published

Journal: Bioinformatics

Year: 2004

Volume: 20

Issue: 18

Pages: 3638-3640

ISSN (print): 1367-4803

ISSN (electronic): 1367-4811

Publisher: Oxford University Press

URL: http://dx.doi.org/10.1093/bioinformatics/bth395

DOI: 10.1093/bioinformatics/bth395

PubMed id: 15247099

Altmetrics

Share